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Timing the day: A genomics perspective on circadian clock

Seminar

Dr Akanksha Bafna (University of Oxford) presents her work on the role of genomic elements in regulating the circadian clock.. Hosted by Dr Sangeeta Chawla.

This event has now finished.

Event date
Friday 21 November 2025, 1pm to 2pm
Location
In-person only
Dianna Bowles Lecture Theatre, B/K/018, Biology Building, Campus West, University of York (Map)
Audience
Open to alumni, staff, students (postgraduate researchers, taught postgraduates, undergraduates)
Admission
Free admission, booking not required

Event details

Abstract

The 24-hour (hr) rotation of the earth around its own axis results in daily cycles of light and temperature. In order to synchronize our bodily functions with the environment almost all living creatures, ranging from bacteria to humans, has evolved with an internal biological clock. In mammals, the command centre of the body clock is situated in a specific part of the mammalian brain known as suprachiasmatic nucleus (SCN) that receives the time-of-day environmental input, integrates the information, and sends the signal to other parts of the body. This intrinsic circadian (approximately one day) clocks align the molecular, behavioural, and physiological processes such as sleep-wake cycles to changing daily environmental conditions. My research focuses on the molecular mechanisms that regulate daily timekeeping in mammals. I'm particularly interested in studying the role of genomic elements such as enhancers in regulating the circadian clock. I have adopted a multiomics approach to study the role of gene-regulatory elements in sleep and daily timekeeping. By means of these regulatory elements, my research is addressing the long standing debate on causation vs. correlation between circadian misalignment and neurological diseases. 

About the speaker

Dr Akanksha Bafna

Dr Akanksha Bafna is a Postdoctoral Researcher in the Sleep and Circadian Neuroscience Institute (SCNi) at the University of Oxford. Her work focuses on the molecular and genomic mechanisms that regulate circadian rhythms, with particular interest in enhancer dynamics and gene regulation in the suprachiasmatic nucleus, the central clock in mammals. She completed her PhD in Genetics at the University of Leicester, followed by research positions at the University of Southampton and the MRC Harwell Science Campus.

She is currently supported by a BBSRC Discovery Fellowship (2024–2027) to investigate genome-wide regulation of circadian timing. Her recent publications include studies in Genome Research (2023) and eLife (2025), which examine chromatin architecture and transcriptional control in the circadian system.

 

Venue details

Wheelchair accessible

Hearing loop

Contact

ybri@york.ac.uk